LOCUS       NC_004943               3626 bp    DNA     circular BCT 06-OCT-2005
DEFINITION  Bifidobacterium longum NCC2705 plasmid pBLO1, complete sequence.
ACCESSION   NC_004943
VERSION     NC_004943.1  GI:32456045
KEYWORDS    .
SOURCE      Bifidobacterium longum NCC2705
  ORGANISM  Bifidobacterium longum NCC2705
            Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales;
            Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (bases 1 to 3626)
  AUTHORS   Schell,M.A., Karmirantzou,M., Snel,B., Vilanova,D., Berger,B.,
            Pessi,G., Zwahlen,M.C., Desiere,F., Bork,P., Delley,M.,
            Pridmore,R.D. and Arigoni,F.
  TITLE     The genome sequence of Bifidobacterium longum reflects its
            adaptation to the human gastrointestinal tract
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (22), 14422-14427 (2002)
   PUBMED   12381787
REFERENCE   2  (bases 1 to 3626)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2003) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 3626)
  AUTHORS   Schell,M.A., Karmirantzou,M., Snel,B., Berger,B., Vilanova,D.,
            Pessi,G., Bork,P. and Arigoni,F.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-AUG-2002) Bioscience, Nestle Research Center, P.O.
            Box 44, Lausanne 26 1000, Switzerland
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AF540971.
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3626
                     /organism="Bifidobacterium longum NCC2705"
                     /mol_type="genomic DNA"
                     /strain="NCC2705"
                     /db_xref="taxon:206672"
                     /plasmid="pBLO1"
     repeat_region   order(663..681,685..703,707..725,729..747)
                     /note="19-bp tandem repeat region"
                     /rpt_type=tandem
     gene            797..1690
                     /gene="rep"
                     /locus_tag="pBLO1_01"
                     /db_xref="GeneID:1789106"
     CDS             797..1690
                     /gene="rep"
                     /locus_tag="pBLO1_01"
                     /codon_start=1
                     /transl_table=11
                     /product="probable replication protein Rep"
                     /protein_id="NP_862282.1"
                     /db_xref="GI:32456046"
                     /db_xref="GeneID:1789106"
                     /translation="MSNEIVKFSNQFNNVALKKFDAVHLDVLMAIASRVRERGTATVE
                     FSFEELRGLMRLKQNLTNKQLADKIVQTNARLLALNYMFEDSGKIIQFALFTVFETDP
                     ANQTLEVSVNERFAFLLNDLTSQFTRFELAEFADLKSKYAKEFYRRAKQYRSSGIWKV
                     SRDEFCRLLNVSKSTSDSVSNLNRVVLKPIVEECGPLLGLKIERQYAKRRLSGFVFTF
                     ARETPPVIDARPVKAKEEQDSGHWTSVAGYGEVFTTTELFDVTAARDHFDGTVDAGEC
                     RYCRYDARNRERHARNAGTLF"
     gene            complement(1687..3384)
                     /gene="mobA"
                     /locus_tag="pBLO1_02"
                     /db_xref="GeneID:1789105"
     CDS             complement(1687..3384)
                     /gene="mobA"
                     /locus_tag="pBLO1_02"
                     /codon_start=1
                     /transl_table=11
                     /product="probable mobilization protein MobA"
                     /protein_id="NP_862283.1"
                     /db_xref="GI:32456047"
                     /db_xref="GeneID:1789105"
                     /translation="MAIYHLSVSNVSRASGSRATATLSYITGKRVHDERRGETYDYGR
                     KERVLRVGTLLPEGAPAEFADPAVLFNAVELHETGRTARPAKKIVVALPREFTPRQRV
                     QALEGYIRENLNADGYAATYAIHDDGQGNNPHAHILVANRQIDPKTGGWAKLKQRMEY
                     VLDERGERVPLIDPKTGAQKLDKRGRRQWKRTSVSLNPLDRKAKLQSLRESWAKTCNA
                     RLDETARIDHRSLEDQGSDLEPTIHEGYAARAIERAGGVSERCQTNREIRRSNDLLTA
                     IRHELGRIFDRLGELFAAKIGQLRQRQARPEAAREPNWRYFEGDARRQLEADRADHAA
                     ALRGRLMDARADVRNRETWWKNHGTEEFEAAKQIIDVACEASREARDAGMFQRGRLRR
                     NAEQVAGEQSERLRGAVPWLEDTEIPADWDQANRFRMRTTKAIHDHDMQPRTGLVAEL
                     ERQLEQAEQAAGERPSPEQVKDLALRMAEQRERAEGQARGANRPEPSGDEPLDLSEPE
                     DWGESSPFEQRATPKTKADLLGELKQRADRRTGRQEAEQRQIDPWSAQPPQRRGHGR"
ORIGIN      
        1 atatcaccat acggatgatg cagaccatgt aaggagccgt ttcgatggtg aagagcctgg
       61 atgagcagat caagtccctg caggagaggc aggcccagct caaggcccgc gaggacgacc
      121 tcaaggcgcg gcgcagggaa cgcgaacgca aggcccgaac caagcgcctg atcgaggtcg
      181 gcgcgatggc cgagtcggcc gccggcttcg agggaggcga cgagagggcc aaggaacaca
      241 tcgcccgcct cgtgcagctc ggctccctgg tggaagccat gtgctccacc gacgtgatgg
      301 gcaactacac gagccgcgag gacctcaggg ccaccgtcgc caaggccctg gaacacaacg
      361 tcaggaccag cgacggcatg aactggaacc tgcacgacct ggtgtacgag gcgctgagcg
      421 aggaatgggc caggagggac ggcgagatcg gcgacccctg ggcggacgaa ccagccagcg
      481 gataccagcc gccctcatac gagcccgtca accccgaacg caggactccc caaacgccct
      541 ccgacggcct gatctgacgt ccggaaaaag gcgctttgcg cccttttata atcttttaaa
      601 atctttttac attcttttag gggtcccgca gccctactct cccaacgagt ttcggacgga
      661 actgagtaca aaataggagc gaattgagta caaaatagga gcggactgag tacaaaatag
      721 gagcgaattg agtacaaaat aggagcggac tgagtaagta agtaattttt atactcagtt
      781 gtgctatgct gtggttatgt ccaatgaaat cgtgaagttc agcaaccagt tcaacaacgt
      841 cgccttgaag aagttcgacg cggtgcacct ggacgtgctc atggcaatcg cctcgagggt
      901 gagggagagg ggcacggcca cggtggagtt ctcgttcgag gagctgcgcg gcctcatgcg
      961 gctgaagcag aacctgacca acaagcagct ggccgacaag atcgtgcaga cgaacgcccg
     1021 cctgctggca ttgaactaca tgttcgagga ctcgggcaag atcatccagt tcgcgctgtt
     1081 cacggtgttc gagaccgacc cggcgaacca gacgcttgag gtgagcgtga acgagcgatt
     1141 cgcgttcctg ctcaacgacc tgaccagcca gttcacgcga ttcgagctgg ccgagttcgc
     1201 cgacctcaag agcaagtacg ccaaggagtt ctaccgcagg gccaagcagt accgcagctc
     1261 gggaatctgg aaagtcagcc gcgacgagtt ctgccgactg ctcaacgtgt ccaagtccac
     1321 gtctgactcg gtctcaaacc tgaacagagt cgtgctgaag ccgattgtcg aagagtgtgg
     1381 cccgctcctt ggcttgaaga tcgagcgcca gtacgcgaag cgtcggctgt cgggcttcgt
     1441 gttcacgttc gcccgtgaaa ccccgcctgt gatcgatgcc aggccggtga aggccaagga
     1501 agagcaagat tccggccatt ggacgagtgt ggcgggctat ggcgaggtgt tcacgaccac
     1561 tgagctgttc gacgtgacgg cggcgcgtga ccacttcgac ggcaccgtgg acgcgggcga
     1621 atgccggtac tgccggtatg acgctcgcaa ccgcgagcgg cacgccagga acgcggggac
     1681 gctgttctag cggccgtggc cgcgcctctg gggcggttgt gcgctccatg ggtcgatctg
     1741 ccgctgttcg gcttcctgac ggcctgtgcg cctgtctgcg cgctgtttga gttccccgag
     1801 caggtcggcc ttggtcttgg gggtggcgcg ctgctcgaac gggctggatt ccccccagtc
     1861 ctcgggttcg ctcagatcca gcggctcgtc gccggacggc tcgggccggt tcgctccccg
     1921 cgcctgtccc tcggcccgtt cccgctgttc ggccatgcgc aatgcgaggt ctttcacctg
     1981 ttcggggctt ggccgctcgc ctgcggcttg ctcggcctgt tcgagctgcc tctccagttc
     2041 ggccacgagg ccggttctcg gctgcatgtc gtggtcgtgg atggccttgg tggtcctcat
     2101 gcggaacctg ttggcctggt cccagtcggc gggaatctcg gtgtcctcga gccatggcac
     2161 cgccccgcgc agcctctcgg actgctctcc ggccacctgt tcggcgttcc tgcgcagcct
     2221 gccgcgctgg aacatgcccg cgtccctggc ctcgcgcgag gcctcgcacg ccacgtcgat
     2281 gatctgcttt gcggcctcaa actcctcggt gccgtggttt ttccaccacg tctcgcggtt
     2341 cctcacgtcg gccctcgcgt ccatgagcct gccgcgcagc gctgccgcat ggtcggccct
     2401 gtcggcttcg agctggcggc gcgcgtcgcc ctcgaaatac cgccagttcg gctccctggc
     2461 cgcttccggc cgcgcctggc gttggcgcag ctggccgatc ttggcggcga acagttcgcc
     2521 caggcggtcg aatatccggc cgagttcgtg tcggatggcg gtcagcaggt cgttgctgcg
     2581 cctgatctca cggttggtct ggcaccgctc gctgacgcct ccggcccgtt cgatggccct
     2641 ggcggcgtag ccctcgtgga tggtgggttc gaggtcgctg ccctggtcct cgaggctcct
     2701 gtggtcgatt ctcgcggtct cgtccagccg cgcgttacag gtcttcgccc aggattcgcg
     2761 cagggactgg agcttggcct tccggtcgag cgggttcagg gacacgctcg tgcgcttcca
     2821 ctgcctgcgg ccccgcttgt cgagcttctg cgccccggtc ttcgggtcga tcagcggcac
     2881 ccgctcgccc cgctcgtcca gcacgtactc catgcgctgc ttgagtttcg cccagccgcc
     2941 cgtcttcggg tcgatctgcc ggttggcgac gaggatgtgc gcgtgcggat tgttgccctg
     3001 gccgtcgtcg tggatggcgt aggtggccgc gtagccgtcc gcgttcaggt tctcccggat
     3061 gtagccctcc agggcctgca cgcgctgcct gggggtgaac tcgcgcggca gggccaccac
     3121 gatcttcttg gccggcctcg ccgtccgtcc ggtctcgtgc agctcgaccg cgttgaacag
     3181 cacggcgggg tcggcgaact cggccggggc cccctccggc agcagggtgc cgacgcgcag
     3241 cacgcgctcc ttgcgcccgt agtcgtaggt ctcgccgcgc cgctcgtcat gcacccgctt
     3301 gccggtgatg tacgagagcg tggccgtggc cctggaaccg ctcgcgcggc tcacgttgga
     3361 gacggacaga tggtagatcg ccatcggctt cggctccttt cgtgatcggc cagggcggcg
     3421 gggtgcgggg cggcggccct gcggcaaggg gttcccaggg gtgcggcgag cacccgctgg
     3481 gcctgccggg aggctccccc ggaagggtgg gaatccaaag ggcaaggccc gtggcccccg
     3541 gagggcgcgc ttacggaaaa tgcaacctcc ggttgcatgt aagtgcgccc taatctttga
     3601 ttagggattt ccttgctggt agaatc
//
