LOCUS       NC_007791               4439 bp    DNA     circular BCT 26-JAN-2007
DEFINITION  Staphylococcus aureus subsp. aureus USA300 plasmid pUSA02, complete
            sequence.
ACCESSION   NC_007791
VERSION     NC_007791.1  GI:87159843
KEYWORDS    .
SOURCE      Staphylococcus aureus subsp. aureus USA300
  ORGANISM  Staphylococcus aureus subsp. aureus USA300
            Bacteria; Firmicutes; Bacillales; Staphylococcus.
REFERENCE   1  (bases 1 to 4439)
  AUTHORS   Diep,B.A., Gill,S.R., Chang,R.F., Phan,T.H., Chen,J.H.,
            Davidson,M.G., Lin,F., Lin,J., Carleton,H.A., Mongodin,E.F.,
            Sensabaugh,G.F. and Perdreau-Remington,F.
  TITLE     Complete genome sequence of USA300, an epidemic clone of
            community-acquired meticillin-resistant Staphylococcus aureus
  JOURNAL   Lancet 367 (9512), 731-739 (2006)
   PUBMED   16517273
REFERENCE   2  (bases 1 to 4439)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-FEB-2006) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 4439)
  AUTHORS   Diep,B.A., Gill,S.R., Chang,R.F., Phan,T.H., Chen,J.H.,
            Davidson,M.G., Lin,F., Lin,J., Carleton,H.A., Mongodin,E.F.,
            Sensabaugh,G.F. and Perdreau-Remington,F.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-JAN-2006) Department of Medicine, University of
            California, San Francisco, San Francisco, CA 94143, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CP000257.
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4439
                     /organism="Staphylococcus aureus subsp. aureus USA300"
                     /mol_type="genomic DNA"
                     /strain="USA300; FPR3757"
                     /sub_species="aureus"
                     /db_xref="taxon:367830"
                     /plasmid="pUSA02"
     gene            36..1415
                     /locus_tag="SAUSA300_pUSA020001"
                     /db_xref="GeneID:3912723"
     CDS             36..1415
                     /locus_tag="SAUSA300_pUSA020001"
                     /note="identified by similarity to SP:P23054; match to
                     protein family HMM PF07690"
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline resistance protein"
                     /protein_id="YP_492684.1"
                     /db_xref="GI:87159845"
                     /db_xref="GeneID:3912723"
                     /translation="MFSLYKKFKGLFYSVLFWLCILSFFSVLNEMVLNVSLPDIANHF
                     NTTPGITNWVNTAYMLTFSIGTAVYGKLSDYINIKKLLIIGISLSCLGSLIAFIGHNH
                     FFILIFGRLVQGVGSAAFPSLIMVVVARNITRKKQGKAFGFIGSIVALGEGLGPSIGG
                     IIAHYIHWSYLLILPMITIVTIPFLIKVMVPGKSTKNTLDIVGIVLMSISIICFMLFT
                     TNYNWTFLILFTIFFVIFIKHISRVSNPFINPKLGKNIPFMLGLFSGGLIFSIVAGFI
                     SMVPYMMKTIYHVNVATIGNSVIFPGTMSVIVFGYFGGFLVDRKGSLFVFILGSLSIS
                     ISFLTIAFFVEFSMWLTTFMFIFVMGGLSFTKTVISKIVSSSLSEEEVASGMSLLNFT
                     SFLSEGTGIAIVGGLLSLQLINRKLVLEFINYSSGVYSNILVAMAILIILCCLLTIIV
                     FKRSKKQFE"
     gene            1601..2842
                     /locus_tag="SAUSA300_pUSA020002"
                     /db_xref="GeneID:3912724"
     CDS             1601..2842
                     /locus_tag="SAUSA300_pUSA020002"
                     /note="identified by similarity to SP:P03864; match to
                     protein family HMM PF01076"
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid recombination enzyme"
                     /protein_id="YP_492685.1"
                     /db_xref="GI:87159846"
                     /db_xref="GeneID:3912724"
                     /translation="MSYSIVRVSKVKSGTNTTGIQKHVQRENNNYENEDIDHSKTYLN
                     YDLVNANKQNFNNLIDEKIEQNYTGKRKIRTDAIKHIDGLITSDNDFFDNQTPEDTKQ
                     FFEYAKEFLEQEYGKDNLLYATVHMDEKTPHMHYGVVPITDDGRLSAKEVVGNKKALT
                     AFQDRFNEHVKQRGYDLERGQSRQVTNAKHEQISQYKQKTEYHKQEYERESQKTDHIK
                     QKNDKLMQEYQKSLNTLKKPINVPYEQETEKVGGLFSKEIQETGNVVISQKDFNEFQK
                     QIKAAQDISEDYEYIKSGRALDDKDKEIREKDDLLNKAVERIENADDNFNQLYENAKP
                     LKENIEIALKLLKILLKELERVLGRNTFAERVNKLTEDEPKLNGLAGNLDKKMNPELY
                     SEQEQQQEQQKNQKRDRGMHL"
     gene            3369..4313
                     /locus_tag="SAUSA300_pUSA020003"
                     /db_xref="GeneID:3912722"
     CDS             3369..4313
                     /locus_tag="SAUSA300_pUSA020003"
                     /note="identified by match to protein family HMM PF02486"
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation protein"
                     /protein_id="YP_492686.1"
                     /db_xref="GI:87159844"
                     /db_xref="GeneID:3912722"
                     /translation="MYKNNHANHSNHLENHDLDNFSKTGYSNSRLDAHTVCISDPKLS
                     FDAMTIVGNLNRDNAQALSKFMSVEPQIRLWDILQTKFKAKALQEKVYIEYDKVKADS
                     WDRRNMRIEFNPNKLTRDEMIWLKQNIISYMEDDGFTRLDLAFDFEDDLSDYYAMSDK
                     AVKKTIFYGRNGKPETKYFGVRDSNRFIRIYNKKKERKDNADAEVMSEHLWRVEIELK
                     RDMVDYWNDCFSDLHILQPDWKTIQRTADRAIVFMLLSDEEEWGKLHRNSRTKYKNLI
                     KEISPVDLTDLMKSTLKANEKQLQKQIDFWQHEFKFWK"
ORIGIN      
        1 tataaacttt agtcacctca agtaaagagg taaaattgtt tagtttatat aaaaaattta
       61 aaggtttgtt ttatagcgtt ttattttggc tttgtattct ttcatttttt agtgtattaa
      121 atgaaatggt tttaaatgtt tctttacctg atattgcaaa tcattttaat actactcctg
      181 gaattacaaa ctgggtaaac actgcatata tgttaacttt ttcgatagga acagcagtat
      241 atggaaaatt atctgattat ataaatataa aaaaattgtt aattattggt attagtttga
      301 gctgtcttgg ttcattgatt gcttttattg gtcacaatca cttttttatt ttgatttttg
      361 gtaggttagt acaaggagta ggatctgctg cattcccttc actgattatg gtggttgtag
      421 ctagaaatat tacaagaaaa aaacaaggca aagcctttgg ttttatagga tcaattgtag
      481 ctttaggtga agggttaggt ccttcaatag ggggaataat agcacattat attcattggt
      541 cttacctact tatacttcct atgattacaa tagtaactat accttttctt attaaagtaa
      601 tggtacctgg taaatcaaca aaaaatacat tagatatcgt aggtattgtt ttaatgtcta
      661 taagtattat atgttttatg ttatttacga caaattataa ttggactttt ttaatactct
      721 tcacaatctt ttttgtgatt tttattaaac atatttcaag agtttctaac ccttttatta
      781 atcctaaact agggaaaaac attccgttta tgcttggttt gttttctggt gggctaatat
      841 tttctatagt agctggtttt atatcaatgg tgccttatat gatgaaaact atttatcatg
      901 taaatgtagc gacaataggt aatagtgtta tttttcctgg aaccatgagt gttattgttt
      961 ttggttattt tggtggtttt ttagtggata gaaaaggatc attatttgtt tttattttag
     1021 gatcattgtc tatctctata agttttttaa ctattgcatt ttttgttgag tttagtatgt
     1081 ggttgactac ttttatgttt atatttgtta tgggcggatt atcttttact aaaacagtta
     1141 tatcaaaaat agtatcaagt agtctttctg aagaagaagt tgcttctgga atgagtttgc
     1201 taaatttcac aagtttttta tcagagggaa caggtatagc aattgtagga ggtttattgt
     1261 cactacaatt gattaatcgt aaactagttc tggaatttat aaattattct tctggagtgt
     1321 atagtaatat tcttgtagcc atggctatcc ttattatttt atgttgtctt ttgacgatta
     1381 ttgtatttaa acgttctaaa aagcagtttg aatagttata ttatattttg gtttagaact
     1441 atgagtggct agcattttgc cactcatttt ttgcgttagc aaaaacaggt ttaagcctcg
     1501 cagagcacac gtattaacga cttattaaaa ataagtctag tgtgttagac ttaaactatt
     1561 aaatacacat gaaacctttg tgcttaggag tgatttttat atgtcttatt ccattgttag
     1621 agtttcaaaa gttaaatctg gaacaaatac aacgggcata caaaaacatg ttcaaagaga
     1681 aaataataat tatgaaaatg aagatataga ccatagtaaa acttacttaa attatgattt
     1741 ggtaaatgct aataaacaga attttaataa cttgattgat gaaaaaatcg aacagaatta
     1801 tacaggcaaa agaaaaatta gaacagacgc gattaaacac attgatggtt taattacatc
     1861 agacaatgat ttctttgata atcaaacgcc agaagataca aagcagtttt ttgaatatgc
     1921 taaagagttt ttagaacaag aatacggtaa agataattta ttatatgcaa cagttcacat
     1981 ggacgaaaaa acaccacata tgcattatgg cgttgttcca ataactgatg atggtcgttt
     2041 aagtgctaaa gaagttgtag gtaataaaaa agctttaaca gcgtttcaag atagatttaa
     2101 tgagcatgtt aaacaacgag gatatgattt agaacgtggg caatcaagac aagtaacaaa
     2161 tgctaaacat gagcaaataa gtcagtataa acaaaaaaca gaatatcata agcaagaata
     2221 tgaacgtgag agccaaaaaa cagaccatat aaagcaaaag aacgataaat taatgcaaga
     2281 gtaccaaaaa tcgttaaata cgcttaaaaa gcctataaat gttccgtatg agcaagaaac
     2341 tgaaaaagta ggtggtttat ttagcaaaga aatacaagaa actggaaatg ttgtaataag
     2401 ccaaaaagat ttcaatgaat ttcagaaaca gataaaagct gctcaagata tttcggaaga
     2461 ttacgagtat ataaagtctg gtagagcctt agatgataaa gataaggaaa tacgagagaa
     2521 agatgattta ttaaataaag cagttgagcg tattgaaaac gcagacgata attttaacca
     2581 actttacgaa aatgcaaagc cacttaaaga gaatatagaa atagcgttaa agcttttaaa
     2641 aatcttacta aaagagttag aacgagtttt aggaagaaat acctttgcgg aaagagttaa
     2701 taagttaaca gaagatgaac caaaactaaa tggtttagca ggaaacttag ataaaaaaat
     2761 gaatccagaa ttatattcag aacaggaaca gcaacaagaa caacaaaaga atcaaaaacg
     2821 agatagaggt atgcacttat agaacatgca tttatgccga gaaaacttat tggttggaat
     2881 gggctatgtg ttagctaact tgttagcgag ttggttggac ttgaattggg attaatccca
     2941 agaaagtacc aactcaacaa cacataaagc cctgtaggtt ccgaccaata aggaaattgg
     3001 aataaagcaa taaaaggagt tgaagaaatg aaattcagag aagcctttga gaattttata
     3061 acaagtaagt atgtacttgg tgttttagta gttttaactg tttaccagat aatacaaatg
     3121 cttaaataaa aaaagacttg atctgattag accaagtctt ttgatagtgt tatattaata
     3181 acaaaataaa aaggagtcgc tcacgccctg accaaagttt gtgaacgaca tcattcaaag
     3241 aaaaaaacac tgagttattt ttataatctt gtatatttag atattaaacg atatttaaat
     3301 atacatcaag atatatattt gggtgagcga ttccttaaac gaaattgaga ttaaggagtc
     3361 gattttttat gtataaaaac aatcatgcaa atcattcaaa tcatttggaa aatcacgatt
     3421 tagacaattt ttctaaaacc ggctactcta atagccggtt ggacgcacat actgtgtgca
     3481 tatctgatcc aaaattaagt tttgatgcaa tgacgatcgt tggaaatctc aaccgagaca
     3541 acgctcaagc cctttctaaa tttatgagtg tagagcccca aataagactt tgggatattc
     3601 ttcaaacaaa gtttaaagct aaagcacttc aagaaaaagt ttatattgaa tatgacaaag
     3661 tgaaagcaga tagttgggat agacgtaata tgcgtattga atttaatcca aacaaactta
     3721 cacgagatga aatgatttgg ttaaaacaaa atataataag ctacatggaa gatgacggtt
     3781 ttacaagatt agatttagcc tttgattttg aagatgattt gagtgactac tatgcaatgt
     3841 ctgataaagc agttaagaaa actatttttt atggtcgtaa tggtaagcca gaaacaaaat
     3901 attttggcgt gagagatagt aatagattta ttagaattta taataaaaag aaagaacgta
     3961 aagataatgc agatgctgaa gttatgtctg aacatttatg gcgtgtagaa atcgaactta
     4021 aaagagatat ggtggattac tggaatgatt gctttagtga tttacatatc ttgcaaccag
     4081 attggaaaac tatccaacgc actgcggata gagcaatagt ttttatgtta ttgagtgatg
     4141 aagaagaatg gggaaagctt cacagaaatt ctagaacaaa atataagaat ttgataaaag
     4201 aaatttcgcc agtcgattta acggacttaa tgaaatcgac tttaaaagcg aacgaaaaac
     4261 aattgcaaaa acaaatcgat ttttggcaac atgaatttaa attttggaaa tagtgtacat
     4321 attaatatta ctgaacaaaa atgatatatt taaactattc taatttagga ggattttttt
     4381 atgaagtgtc tatttaaaaa tttggggaat ttatatgagg tgaaagaata atttacccc
//
