LOCUS       NC_007720               4316 bp    DNA     circular BCT 18-MAY-2006
DEFINITION  Aster yellows witches'-broom phytoplasma AYWB plasmid pAYWB-IV,
            complete sequence.
ACCESSION   NC_007720
VERSION     NC_007720.1  GI:85057971
KEYWORDS    .
SOURCE      Aster yellows witches'-broom phytoplasma AYWB
  ORGANISM  Aster yellows witches'-broom phytoplasma AYWB
            Bacteria; Firmicutes; Mollicutes; Acholeplasmatales;
            Acholeplasmataceae; Candidatus Phytoplasma; Candidatus Phytoplasma
            asteris.
REFERENCE   1  (bases 1 to 4316)
  AUTHORS   Bai,X., Zhang,J., Ewing,A., Miller,S.A., Jancso Radek,A.,
            Shevchenko,D.V., Tsukerman,K., Walunas,T., Lapidus,A.,
            Campbell,J.W. and Hogenhout,S.A.
  TITLE     Living with genome instability: the adaptation of phytoplasmas to
            diverse environments of their insect and plant hosts
  JOURNAL   J. Bacteriol. 188 (10), 3682-3696 (2006)
   PUBMED   16672622
REFERENCE   2  (bases 1 to 4316)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JAN-2006) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 4316)
  AUTHORS   Bai,X. and Hogenhout,S.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-APR-2005) Department of Entomology, The Ohio State
            University - OARDC, 1680 Madison Avenue, Wooster, OH 44691, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CP000065.
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4316
                     /organism="Aster yellows witches'-broom phytoplasma AYWB"
                     /mol_type="genomic DNA"
                     /specific_host="Lactuca sativa"
                     /db_xref="taxon:322098"
                     /plasmid="pAYWB-IV"
     misc_feature    1..4316
                     /note="Sequencing Center: Integrated Genomics, Inc., 2201
                     W. Campbell Park Dr., Chicago IL 60612"
     gene            1..1128
                     /gene="rep"
                     /locus_tag="AYWB_pIV01"
                     /note="pAYWBIV01"
                     /db_xref="GeneID:3866203"
     CDS             1..1128
                     /gene="rep"
                     /locus_tag="AYWB_pIV01"
                     /codon_start=1
                     /transl_table=11
                     /product="replication protein"
                     /protein_id="YP_456884.1"
                     /db_xref="GI:85057972"
                     /db_xref="GeneID:3866203"
                     /translation="MKLKICELVINSDKINKTKIENILELKKKAIQNYAYILHDKDIY
                     QNEKEATLNGKNIGDLKKPHWHIYLRFNYAHDTKHISQWFNTQDNFVSKIKGRFSDAL
                     MYMIHANRSDKHQYDEKAVVSKFDWKSEAQQDIFLREYKIDSRLEEILSKIQSGEIKE
                     CNSTNHISIIENNIYSSAIEEAVKYRNNTLKGMDRQMECVFITGLSGCGKTTLAKKIA
                     KNKKYQTYISSGSNDVLDDYSRGEECIILDDLRSNCLGLSDLLKMLDNNTSSSVKSRY
                     KNKVLECKLIIITTVKSIDDFFEDIFKKDESIIQLKRRCKLHIKIDSKYIYSSIWNPL
                     EMKYDLIDKKPNNLLNEFQLKTLSKKEAKEFIKQITNTDDI"
     gene            1420..1890
                     /locus_tag="AYWB_pIV02"
                     /note="pAYWBIV02"
                     /db_xref="GeneID:3866204"
     CDS             1420..1890
                     /locus_tag="AYWB_pIV02"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="YP_456885.1"
                     /db_xref="GI:85057973"
                     /db_xref="GeneID:3866204"
                     /translation="MQNLNLNIDAFIDKINYYVTYIITFLKYVFNSIIAIKNVDFSLF
                     NIPNSIGIICHFLFAIFCILIFITLLVFLGSIWNIIKTIIKWILYPFKLLFKLIKWIF
                     SPKSELKQPIKTNNLNQYDLNKLQRKINDLEYKLNLQKRQNVIKPFENKYQKRG"
     gene            1894..2376
                     /locus_tag="AYWB_pIV03"
                     /note="pAYWBIV03"
                     /db_xref="GeneID:3866205"
     CDS             1894..2376
                     /locus_tag="AYWB_pIV03"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="YP_456886.1"
                     /db_xref="GI:85057974"
                     /db_xref="GeneID:3866205"
                     /translation="MKNNNHKNPKNKIFIIWGLFISGVILVLLMLLLLAINKPQPKTD
                     TQNQQHLQSNINAEQEQQTYNRVINKIESEIDKLTQQQEQTPLLKYPPKIRYYDDGIK
                     IFSIEKYNQDTGKLIKDIYYKNDGETIEYTVDYNSDGSILNTFYNPDGTVRDTYHSNE
                     "
     gene            2369..2929
                     /locus_tag="AYWB_pIV04"
                     /note="pAYWBIV04"
                     /db_xref="GeneID:3866206"
     CDS             2369..2929
                     /locus_tag="AYWB_pIV04"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="YP_456887.1"
                     /db_xref="GI:85057975"
                     /db_xref="GeneID:3866206"
                     /translation="MNKKRKIILKIWIIFISILILIMLFLLGLRLPKLLKSKQQKTEN
                     QVQNQSQYQIQYIHDTNKVQNIVRLLTELKTLKQLKNKQLQKQVEKQKETQPINNLDF
                     FDPKFQNELYHKLSKSMDEQMSQFSQKDFVSSEIPFEQLNDNNKLVKDIAVVSLTIGA
                     GVISCVVLAPIFASVGPIAAPVALLL"
     gene            2951..3265
                     /gene="ssb"
                     /locus_tag="AYWB_pIV05"
                     /note="pAYWBIV05"
                     /db_xref="GeneID:3866207"
     CDS             2951..3265
                     /gene="ssb"
                     /locus_tag="AYWB_pIV05"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA binding protein"
                     /protein_id="YP_456888.1"
                     /db_xref="GI:85057976"
                     /db_xref="GeneID:3866207"
                     /translation="MLNKVQLIGNITHDLEPTHINTNEGQISKLDFQIAVNNKDKTQF
                     IPCVVFRNQAENMSMYLHKGSKVYLEGTLSIEKYTNNEGENKTATKVIVQKVIFLDNK
                     DK"
     gene            3316..3651
                     /locus_tag="AYWB_pIV06"
                     /note="pAYWBIV06"
                     /db_xref="GeneID:3866208"
     CDS             3316..3651
                     /locus_tag="AYWB_pIV06"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="YP_456889.1"
                     /db_xref="GI:85057977"
                     /db_xref="GeneID:3866208"
                     /translation="MKKSEINKNTINFFKEMKSKGFKPEDFQRNYYFFEIKDFKAAGF
                     TNDEISFFDYTINELKQKGFTNKQIDELSYYDEYYFGVDENEQNKIIDKLKNNGFTNE
                     LLKSIKLIV"
ORIGIN      
        1 atgaaattaa agatttgtga acttgttatt aattctgata aaattaataa aactaaaata
       61 gaaaatattt tagaacttaa aaaaaaagcc attcaaaatt atgcctatat tttacatgat
      121 aaagatattt atcaaaatga aaaagaggct acattgaatg gtaaaaatat aggggatcta
      181 aaaaaacctc attggcatat atatttaaga tttaattatg cacatgatac aaaacatatt
      241 tctcaatggt ttaatacaca ggataatttt gtttccaaaa taaaaggtag atttagtgat
      301 gctttaatgt atatgattca tgctaatcgt tctgataaac atcaatatga cgaaaaagca
      361 gtggttagta agttcgactg gaaatcggaa gcacaacaag atattttcct gcgtgaatat
      421 aaaatagact cccgtttaga agagatttta tctaaaatac aatcaggaga aataaaagag
      481 tgcaacagca ctaaccacat ttctattata gagaataata tttattcttc agcaatagaa
      541 gaagcagtta agtatagaaa caatactttg aaaggaatgg atagacaaat ggaatgtgtt
      601 tttattacag gtttaagtgg ttgtggtaaa actacgttag ctaaaaaaat agctaaaaat
      661 aaaaaatatc aaacttatat ttcatcaggt agtaatgatg ttttagatga ttatagtaga
      721 ggcgaagaat gtattatttt agatgaccta cgttctaatt gtctaggttt atcagactta
      781 ttaaaaatgt tagataataa tacttcatct tcagttaaga gtcgttataa aaataaagtt
      841 ttagaatgta aattaattat tattacaaca gttaaaagta ttgatgattt ttttgaagat
      901 attttcaaaa aagatgaaag cattattcaa ttaaaacgtc gttgtaaatt acatattaaa
      961 atagattcta aatatattta ttctagtatt tggaatccat tggaaatgaa atatgattta
     1021 atagataaaa aacctaataa tttattaaat gaatttcaat taaaaacttt gtcaaaaaaa
     1081 gaagcaaaag agtttattaa acaaataact aatacagatg atatttaaat tatttctata
     1141 cttaaatgtt tttttttgat tgtttttatg tgtattttac taggtttttt gatataatat
     1201 aagtgtattc acagcaacaa taattaataa ttaataattt ataacatttt tatatgttaa
     1261 aataattatg accttatata tatgttcgtt gctgtgcgta tatgtagggt catttttgtt
     1321 ttgtaaagct cacattaaaa tataaaaaaa atagttatat aaatcaaccc tcttcgcaaa
     1381 agaaacgatt tatataacta tcatgaaagg atgcattaaa tgcaaaacct taatttaaac
     1441 atagacgcat ttattgataa aataaattac tatgttactt atattataac atttttaaaa
     1501 tatgttttta acagtattat tgcaatcaaa aacgttgatt tcagtttatt caatatacca
     1561 aatagtatag gaataatttg tcattttctt tttgctattt tttgcatttt aatctttatc
     1621 accttgttag tttttttagg ttctatatgg aatattatta aaacaataat caaatggatt
     1681 ttatatccgt ttaaattatt atttaaatta attaaatgga ttttctcacc taaatcagaa
     1741 ttaaaacaac caattaaaac taataacttg aatcaatatg atttaaacaa attacaaaga
     1801 aagataaatg atttagaata caaacttaat ttacaaaaaa gacaaaatgt aattaaacca
     1861 tttgaaaaca aatatcaaaa aagaggttaa attatgaaaa acaataatca caaaaaccca
     1921 aaaaataaaa tatttatcat ttggggttta tttattagtg gagttattct tgttctttta
     1981 atgcttcttt tattagctat taataaacct caacctaaaa ctgataccca aaatcaacaa
     2041 catttacaat ctaatattaa tgccgaacaa gaacaacaaa cctataatag ggttattaat
     2101 aagatagaat ctgaaataga taaattaacc caacaacaag aacaaactcc attacttaaa
     2161 tatcctccta aaataagata ttatgatgat ggaataaaga tcttttccat agaaaaatat
     2221 aatcaagata caggtaaatt aattaaagac atttattata aaaatgatgg agaaacaata
     2281 gaatatactg ttgattacaa ttctgatggt tctatcttaa acacttttta taacccagac
     2341 ggaactgtta gagacactta tcattctaat gaataaaaaa agaaaaatta tattaaagat
     2401 ttggattata tttatatcaa ttcttatttt aatcatgtta tttcttttag gtttaagatt
     2461 acctaaatta cttaaatcaa aacaacaaaa aactgaaaat caagttcaaa accaatctca
     2521 atatcaaatc caatatattc atgatactaa taaggttcaa aatattgtta gattattaac
     2581 tgaattaaaa acattaaaac aattaaaaaa caaacaatta caaaaacaag ttgaaaaaca
     2641 aaaagaaact caaccaataa ataatttaga tttctttgac cctaagtttc aaaatgaact
     2701 ttatcataaa cttagtaaaa gtatggatga gcaaatgagt caattttctc aaaaagattt
     2761 tgtttcatct gaaattccat ttgaacaatt aaatgacaat aataaattag ttaaagatat
     2821 cgcagttgta agtttaacta ttggtgcagg agttattagc tgtgtagttc tagctcctat
     2881 ttttgcatct gtaggtccaa ttgcagctcc tgttgcttta ttactttaat attaagaaag
     2941 gagaaataaa atgttaaata aagttcaatt aataggtaat ataactcatg acttagagcc
     3001 aacacatatt aatactaatg agggtcaaat atctaaatta gatttccaaa tagctgtaaa
     3061 taataaagat aaaactcaat tcattccatg tgttgttttt agaaaccaag ctgaaaacat
     3121 gagtatgtat ttacataaag gttcaaaagt atatttagaa ggaacgttat caattgaaaa
     3181 atataccaat aacgaaggcg aaaataaaac tgctactaaa gtaatagttc aaaaagttat
     3241 ttttttagat aataaagata aataaaacaa aggcccctat taatttaggg gctttagata
     3301 gaaagtatta tatcaatgaa aaaaagtgaa atcaataaaa atacaattaa tttttttaaa
     3361 gagatgaaat ctaaaggatt taaacctgaa gattttcaaa gaaattatta tttttttgaa
     3421 attaaagatt ttaaagctgc tggatttaca aatgacgaaa tatcattttt tgattataca
     3481 attaatgaat taaaacaaaa gggatttaca aataaacaaa ttgatgaatt aagttattat
     3541 gatgaatatt attttggggt agatgaaaac gaacaaaaca aaataataga taaattaaaa
     3601 aataatggat ttacaaatga attattaaaa tctattaaac ttatagttta atatagtaaa
     3661 aaaataaata aaacaaaggc ccctattaaa ttaggggctt taaaaatata aaaatcgtct
     3721 cccgcggaat gttaatttta atcaatctat taattttata ataaccttta aacacattat
     3781 tttatatcta tatgacgttt caaatgacat ttaatatctt ttatctaacg cacataaata
     3841 aaggtctaag atatctcgct tagcgagcta ggcgtccagc cgatgcatct taattatatt
     3901 atgatacccc ctcctataaa gtcccctttt ggggatttag gggttttttt aaattaaaaa
     3961 ttcgctaggt ttttcctagg ttttgttagt tttagtaaca tccctgagaa tatagataga
     4021 aagatatata aaatcctcag tatttcccta ccatagaggg cttgtctcta tggtagggag
     4081 aatggtagaa cgaattatat tgatttatta gtgttttcct aatgattttc aatttgcatt
     4141 ttctaccatt tttaacttgt taaagtagaa catatatgtt ataattaaat tgagcgcctt
     4201 tgctgcgtta ggcagtaaag gagtagcgaa aataaaaaaa ccagcgcctt gcccgtgaac
     4261 tatcgggtaa ggagtagctg gtatccgtta aaaaatatta aaaaggataa attaaa
//
